BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003B08LP1|AL425073
(908 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1516 1752 0.0
>3x_Contig1516
Length = 8750
Score = 1752 bits (882), Expect = 0.0
Identities = 902/908 (99%), Gaps = 2/908 (0%)
Strand = Plus / Plus
Query: 1 atcatccattttgtgtaagtgatgatacctacttaattgtaaataataccctgtttccag 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 795 atcatccattttgtgtaagtgatgatgcctacttaattgtaaataataccctgtttccag 854
Query: 61 gccagatagaactgtacacagaataaaagcagttgcactacaaaacggattttctattga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 gccagatagaactgtacacagaataaaagcagttgcactacaaaacggattttctattga 914
Query: 121 gtagagaacattgaaaaaaaatgttttttttttttgttttttttttttttggctcaagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 gtagagaacattgaaaaaaaatgttttttttttttgttttttttttttttggctcaagtt 974
Query: 181 cttaagaaaacggctcagtgaaaggaattacttttgtgatctactggcgtcaaaggggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 cttaagaaaacggctcagtgaaaggaattacttttgtgatctactggcgtcaaaggggaa 1034
Query: 241 atacctagaaaagtgggtaattgtcatagtgaaactgttgaaactgatgataaccgaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 atacctagaaaagtgggtaattgtcatagtgaaactgttgaaactgatgataaccgaaag 1094
Query: 301 tggkgtttgttagttaccaggcacagaattatcgaaaatcagatggagttacagtaaacc 360
||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1095 tggtgtttgttagttaccaggcacagaattatcgaaaa-cagatggagttacagtaaacc 1153
Query: 361 cgattaatgactgtgacgcaggcgcaggaccttaagaccatttttgttccgttatctgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1154 cgattaatgactgtgacgcaggcgcaggaccttaagaccatttttgttccgttatctgtc 1213
Query: 421 catacaggcgcgttaccctgagaataaggggttacaacaagaacaaaatcattagaataa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1214 catacaggcgcgttaccctgagaataaggggttacaacaagaacaaaatcattagaataa 1273
Query: 481 atcaacaatcctcagatattgctgtagacgatgatgtgatcagtttttccgtgaggcttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1274 atcaacaatcctcagatattgctgtagacgatgatgtgatcagtttttccgtgaggcttt 1333
Query: 541 aataatggctcatgcggttgtggaatcaggagaaaagaaggagtaagcaataaaaaatac 600
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1334 aataatggctcatgcggttgtggaatcaggagaaaagaaggagtaagcaa-aaaaaatac 1392
Query: 601 aacaacagcgctgttggttgtatgcccgctgtcccaagcttagatccgaacaaacgcaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1393 aacaacagcgctgttggttgtatgcccgctgtcccaagcttagatccgaacaaacgcaag 1452
Query: 661 gaattgggggagatagacattkaatggtgttccgtttagtttcataatgtataccatagg 720
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1453 gaattgggggagatagacattgaatggtgttccgtttagtttcataatgtataccatagg 1512
Query: 721 atgtaagtgagaacggcggttgattcggtcacgcaaacgccaataagactgttaaacata 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1513 atgtaagtgagaacggcggttgattcggtcacgcaaacgccaataagactgttaaacata 1572
Query: 781 cgcaggattttgtcagcaagattcttttctgccgtttctttttaccgaaaatattcttgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1573 cgcaggattttgtcagcaagattcttttctgccgtttctttttaccgaaaatattcttgt 1632
Query: 841 gtcaggtcattcaaagatgacagaaaaacgtgatcaatgaagagtgggcagaaaggtggg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1633 gtcaggtcattcaaagatgacagaaaaacgtgatcaatgaagagtgggcagaaaggtggg 1692
Query: 901 ktgactgc 908
|||||||
Sbjct: 1693 ttgactgc 1700
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 20,226
Number of Sequences: 1807
Number of extensions: 20226
Number of successful extensions: 3018
Number of sequences better than 1.0e-20: 1
length of query: 908
length of database: 10,358,551
effective HSP length: 16
effective length of query: 892
effective length of database: 10,329,639
effective search space: 9214037988
effective search space used: 9214037988
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)